recipe qualimap

Quality control of alignment sequencing data and its derivatives like feature counts

Homepage

http://qualimap.bioinfo.cipf.es/

License

GPLv2

Recipe

/qualimap/meta.yaml

Links

biotools: qualimap

package qualimap

Versions

2.2.2d-2,  2.2.2d-1,  2.2.2d-0,  2.2.2c-1,  2.2.2c-0,  2.2.2b-1,  2.2.2b-0,  2.2.2a-3,  2.2.2a-2, 

2.2.2d-2,  2.2.2d-1,  2.2.2d-0,  2.2.2c-1,  2.2.2c-0,  2.2.2b-1,  2.2.2b-0,  2.2.2a-3,  2.2.2a-2,  2.2.2a-1,  2.2.2a-0,  2.2-0,  2.1.3-1,  2.1.3-0,  2.1.1-1,  2.1.1-0

Depends

• bioconductor-noiseq

• bioconductor-rsamtools

• bioconductor-rtracklayer

• fonts-conda-ecosystem

• openjdk

• r-optparse

• r-xml

Required By

• uvp

• targqc

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install qualimap

and update with:

conda update qualimap

or use the docker container:

docker pull quay.io/biocontainers/qualimap:<tag>

(see qualimap/tags for valid values for <tag>)

Download stats

Link to this page

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