recipe quatradis

A set of tools to analyse the output from TraDIS analyses

Homepage:

https://github.com/quadram-institute-bioscience/QuaTradis

License:

GPL3 / GPL-3.0-only

Recipe:

/quatradis/meta.yaml

package quatradis

Versions:

0.8.3-0,  0.8.2-0,  0.7.0-1,  0.7.0-0,  0.6.2-0,  0.5.4-0,  0.4.9-0,  0.4.5-1,  0.4.5-0, 

0.8.3-0,  0.8.2-0,  0.7.0-1,  0.7.0-0,  0.6.2-0,  0.5.4-0,  0.4.9-0,  0.4.5-1,  0.4.5-0,  0.4.4-0,  0.4.2-1,  0.4.2-0,  0.3.4-0

Depends:

• biopython

• bwa

• htslib

• matplotlib-base

• minimap2

• numpy

• pandas

• pysam

• python >=3

• r-base

• r-getopt

• r-mass

• setuptools

• smalt

• snakemake

• snakeviz

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install quatradis

and update with:

conda update quatradis

or use the docker container:

docker pull quay.io/biocontainers/quatradis:<tag>

(see quatradis/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/quatradis/README.html)