recipe r-DGEclustering

DGEclustering is an R package for multidimensional clustering of differential gene expression datasets, and it integrates GO annotations to improve the clustering result.

Homepage

https://github.com/reneechou123/DGEclustering

License

MIT

Recipe

/r-DGEclustering/meta.yaml

package r-dgeclustering

Versions

0.1.0-3,  0.1.0-2,  0.1.0-1,  0.1.0-0

Depends

• bioconductor-annotationdbi

• bioconductor-clusterprofiler

• bioconductor-genomicfeatures

• bioconductor-gosemsim

• r-base >=4.1,<4.2.0a0

• r-cluster

• r-factominer

• r-ggplot2

• r-intego

• r-reshape2

• r-rlist

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-dgeclustering

and update with:

conda update r-dgeclustering

or use the docker container:

docker pull quay.io/biocontainers/r-dgeclustering:<tag>

(see r-dgeclustering/tags for valid values for <tag>)

Download stats

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