r-aroma.affymetrix

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A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.

Home http://www.aroma-project.org/, https://github.com/HenrikBengtsson/aroma.affymetrix
Versions 3.0.0, 3.1.0
License LGPL (>= 2.1)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-aroma.affymetrix

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-aroma.affymetrix

and update with:

conda update r-aroma.affymetrix

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-aroma.affymetrix.