recipe r-cellassign

Automated, probabilistic assignment of cell types in scRNA-seq data

Homepage:

https://github.com/Irrationone/cellassign

License:

Apache-2.0

Recipe:

/r-cellassign/meta.yaml

package r-cellassign

Versions:

0.99.2-5,  0.99.2-4,  0.99.2-3,  0.99.2-2,  0.99.2-1,  0.99.2-0,  0.99.1-0,  0.99.0-1,  0.99.0-0

Depends:

• bioconductor-genomeinfodbdata

• bioconductor-scran

• bioconductor-summarizedexperiment

• r-base >=4.2,<4.3.0a0

• r-glue

• r-tensorflow

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-cellassign

and update with:

conda update r-cellassign

or use the docker container:

docker pull quay.io/biocontainers/r-cellassign:<tag>

(see r-cellassign/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-cellassign/README.html)