recipe r-cimpl

An analysis package for multi sample insertional mutagenesis data (including viral- and transposon-based systems) using Gaussian kernel convolution to identify common insertion sites.

Homepage:

http://ccb.nki.nl/software/

License:

GPL-3

Recipe:

/r-cimpl/meta.yaml

package r-cimpl

Versions:

1.1-4,  1.1-3,  1.1-2,  1.1-0

Depends:

• bioconductor-biomart

• bioconductor-biostrings

• r-base >=4.1,<4.2.0a0

• r-kernsmooth

• r-mass

• r-xtable

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-cimpl

and update with:

conda update r-cimpl

or use the docker container:

docker pull quay.io/biocontainers/r-cimpl:<tag>

(see r-cimpl/tags for valid values for <tag>)

Download stats

Link to this page

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