recipe r-cimpl

An analysis package for multi sample insertional mutagenesis data (including viral- and transposon-based systems) using Gaussian kernel convolution to identify common insertion sites.

Homepage

http://ccb.nki.nl/software/

License

GPL-3

Recipe

/r-cimpl/meta.yaml

package r-cimpl

Versions

1.1-4,  1.1-3,  1.1-2,  1.1-0

Depends

• bioconductor-biomart

• bioconductor-biostrings

• r-base >=4.1,<4.2.0a0

• r-kernsmooth

• r-mass

• r-xtable

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-cimpl

and update with:

conda update r-cimpl

or use the docker container:

docker pull quay.io/biocontainers/r-cimpl:<tag>

(see r-cimpl/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-cimpl/README.html)