r-empiricalfdr.deseq2

downloads

Auxiliary functions for the DESeq2 package to simulate read counts according to the null hypothesis (i.e., with empirical sample size factors, per-gene total counts and dispersions, but without effects of predictor variables) and to compute the empirical false discovery rate.

Home https://CRAN.R-project.org/package=empiricalFDR.DESeq2
Versions 1.0.3
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-empiricalfdr.deseq2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-empiricalfdr.deseq2

and update with:

conda update r-empiricalfdr.deseq2

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-empiricalfdr.deseq2.