- recipe r-mgsz
Performs gene set analysis based on GSZ scoring function and asymptotic p-value. It is different from GSZ in that it implements asymptotic p-values instead of empirical p-values. Asymptotic p-values are calculated by fitting suitable distribution model to the null distribution. Unlike empirical p-values, resolution of asymptotic p-values are independent of the number of permutations and hence requires considerably fewer permutations. In addition, this package allows gene set analysis with seven other popular gene set analysis methods.
- Homepage
- License
GPL3 / GPL (>= 2)
- Recipe
- package r-mgsz¶
-
- Versions
1.0-3
,1.0-2
,1.0-1
,1.0-0
- Depends
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install r-mgsz
and update with:
conda update r-mgsz
or use the docker container:
docker pull quay.io/biocontainers/r-mgsz:<tag>
(see r-mgsz/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-mgsz/README.html)