recipe r-pipette

Pipette biological data in and out of R.

Homepage:

https://r.acidgenomics.com/packages/pipette/

Developer docs:

https://github.com/acidgenomics/r-pipette

License:

GPL / AGPL-3.0

Recipe:

/r-pipette/meta.yaml

package r-pipette

Versions:

0.10.4-1,  0.10.4-0,  0.10.3-0,  0.10.2-0,  0.10.1-1,  0.10.1-0,  0.10.0-0,  0.8.0-1,  0.8.0-0, 

0.10.4-1,  0.10.4-0,  0.10.3-0,  0.10.2-0,  0.10.1-1,  0.10.1-0,  0.10.0-0,  0.8.0-1,  0.8.0-0,  0.7.2-0,  0.7.1-0,  0.7.0-0,  0.6.3-0,  0.6.2-0,  0.6.1-0,  0.6.0-0,  0.5.15-2,  0.5.15-1,  0.5.15-0,  0.5.14-2,  0.5.14-0,  0.4.22-1,  0.4.22-0,  0.4.20-0,  0.4.19-0,  0.4.14-0,  0.4.13-0,  0.4.10-0,  0.4.9-0,  0.4.7-0,  0.4.6-0,  0.4.5-0,  0.4.3-1,  0.4.3-0,  0.4.2-0,  0.4.1-0

Depends:

• bioconductor-biocfilecache >=2.4.0

• bioconductor-biocgenerics >=0.42.0

• bioconductor-biocio >=1.6.0

• bioconductor-biostrings >=2.64.1

• bioconductor-genomicranges >=1.48.0

• bioconductor-iranges >=2.30.1

• bioconductor-rtracklayer >=1.56.1

• bioconductor-s4vectors >=0.34.0

• r-acidbase >=0.6.8

• r-acidcli >=0.2.4

• r-acidgenerics >=0.6.4

• r-base >=4.2,<4.3.0a0

• r-data.table >=1.14.4

• r-digest >=0.6.30

• r-goalie >=0.6.6

• r-httr >=1.4.4

• r-jsonlite >=1.8.3

• r-matrix >=1.5.1

• r-ontologyindex >=2.10

• r-pzfx >=0.3.0

• r-rcurl >=1.98

• r-readr >=2.1.3

• r-readxl >=1.4.1

• r-rio >=0.5.29

• r-stringi >=1.7.8

• r-syntactic >=0.6.3

• r-tibble >=3.1.8

• r-yaml >=2.3.6

Required By:

• r-acidexperiment

• r-bcbiornaseq

• r-acidplots

• r-deseqanalysis

• r-bcbiosinglecell

• r-acidsinglecell

• r-basejump

• r-acidgsea

• r-bcbiobase

• r-cellosaurus

• r-chromium

• r-acidplyr

• r-acidgenomes

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-pipette

and update with:

conda update r-pipette

or use the docker container:

docker pull quay.io/biocontainers/r-pipette:<tag>

(see r-pipette/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-pipette/README.html)