recipe r-signac

A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart and Butler et al. (2019) <doi:10.1016/j.cell.2019.05.031>.

Homepage

https://github.com/timoast/signac, https://satijalab.org/signac

License

MIT / MIT

Recipe

/r-signac/meta.yaml

package r-signac

(downloads) docker_r-signac

Versions

1.4.0-01.3.0-01.2.1-11.2.1-01.2.0-01.1.1-11.1.1-01.1.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-signac

and update with:

conda update r-signac

or use the docker container:

docker pull quay.io/biocontainers/r-signac:<tag>

(see r-signac/tags for valid values for <tag>)

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