recipe rabies

RABIES: Rodent Automated Bold Improvement of EPI Sequences.

Homepage:

https://github.com/CoBrALab/RABIES

License:

GPL-2.0

Recipe:

/rabies/meta.yaml

package rabies

versions:

0.5.1-0

depends etelemetry:

>=0.2.0

depends matplotlib-base:

3.3.4

depends networkx:

<3

depends nibabel:

3.2.1

depends nilearn:

0.7.1

depends nipype:

1.6.1

depends numpy:

1.20.1

depends pandas:

1.2.4

depends pathos:

0.2.7

depends pybids:

0.16.3

depends python:

>=3.9

depends qbatch:

2.3

depends scikit-learn:

0.24.1

depends scipy:

1.8.1

depends seaborn:

0.11.1

depends simpleitk:

2.0.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install rabies

and update with::

   mamba update rabies

To create a new environment, run:

mamba create --name myenvname rabies

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/rabies:<tag>

(see `rabies/tags`_ for valid values for ``<tag>``)

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