recipe rdock

A Fast, Versatile and Open Source Program for Docking Ligands to Proteins and Nucleic Acids

Homepage:

http://rdock.sourceforge.net/

License:

LGPLv3

Recipe:

/rdock/meta.yaml

Links:

doi: 10.1371/journal.pcbi.1003571, usegalaxy-eu: rdock_rbdock

package rdock

(downloads) docker_rdock

versions:

2013.1-1,  2013.1-0

depends libgcc:

depends numpy:

depends openbabel:

depends perl:

5.22.0*

depends popt:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install rdock

and update with::

   mamba update rdock

To create a new environment, run:

mamba create --name myenvname rdock

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/rdock:<tag>

(see `rdock/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/rdock/README.html)