recipe renano

RENANO is a FASTQ lossless reference-based compression algorithm especially designed for nanopore sequencing FASTQ files.

Homepage:

https://github.com/guilledufort/RENANO

License:

MIT / MIT License

Recipe:

/renano/meta.yaml

package renano

(downloads) docker_renano

versions:

1.3-4,  1.3-3,  1.3-2,  1.3-1,  1.3-0,  1.1-1,  1.1-0,  1.0-0

depends _openmp_mutex:

>=4.5

depends libgcc:

>=13

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

depends zlib:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install renano

and update with::

   mamba update renano

To create a new environment, run:

mamba create --name myenvname renano

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/renano:<tag>

(see `renano/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/renano/README.html)