recipe riboseq-rust

Ribo-seq Unit Step Transformation. Tools to characterise the determinants of ribosome profiling read density across mRNA. May be used to examine relative decoding rates and and for quality assessment

Homepage

https://lapti.ucc.ie/rust/

License

GPL-3.0

Recipe

/riboseq-rust/meta.yaml

package riboseq-rust

(downloads) docker_riboseq-rust

Versions

1.2-0

Depends argparse

Depends matplotlib

Depends numpy

Depends pysam

Depends python

2.7*

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install riboseq-rust

and update with:

conda update riboseq-rust

or use the docker container:

docker pull quay.io/biocontainers/riboseq-rust:<tag>

(see riboseq-rust/tags for valid values for <tag>)