recipe rmats2sashimiplot

rmats2sashimiplot is a tool that generates sahimi plots from rMATS outputs.

Homepage

https://github.com/Xinglab/rmats2sashimiplot

License

GPL / GPL-2.0

Recipe

/rmats2sashimiplot/meta.yaml

package rmats2sashimiplot

(downloads) docker_rmats2sashimiplot

Versions

2.0.3-2, 2.0.3-0, 2.0.0-0

Depends matplotlib

Depends pysam

0.9.0

Depends python

>=2.7,<2.8.0a0

Depends samtools

1.3.1

Depends scipy

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rmats2sashimiplot

and update with:

conda update rmats2sashimiplot

or use the docker container:

docker pull quay.io/biocontainers/rmats2sashimiplot:<tag>

(see rmats2sashimiplot/tags for valid values for <tag>)