- recipe rnashapes
RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.
- Homepage:
- License:
GPLv3+
- Recipe:
- Links:
- package rnashapes¶
-
- Versions:
3.3.2-2
,3.3.2-1
,3.3.2-0
,3.3.0-7
,3.3.0-6
,3.3.0-5
,3.3.0-4
,3.3.0-3
,3.3.0-0
,3.3.2-2
,3.3.2-1
,3.3.2-0
,3.3.0-7
,3.3.0-6
,3.3.0-5
,3.3.0-4
,3.3.0-3
,3.3.0-0
,2.1.6-4
,2.1.6-3
,2.1.6-2
,2.1.6-1
,2.1.6-0
- Depends:
bellmans-gapc
>=2021.04.28
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
perl
>=5.32.1,<5.33.0a0 *_perl5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install rnashapes
and update with:
conda update rnashapes
or use the docker container:
docker pull quay.io/biocontainers/rnashapes:<tag>
(see rnashapes/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/rnashapes/README.html)