rust-overlaps

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A fast and secure command line utilility for enumerating all suffix-prefix overlaps within a set of sequences, satisfying a user-specified minimal overlap length and maximal error rate.

Home https://github.com/jbaaijens/rust-overlaps
Versions 0.1.1
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/rust-overlaps

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rust-overlaps

and update with:

conda update rust-overlaps

docker

A Docker container is available at https://quay.io/repository/biocontainers/rust-overlaps.