- recipe sc3-scripts
A set of wrappers for individual components of the SC3 package. Functions R packages are hard to call when building workflows outside of R, so this package adds a set of simple wrappers with robust argument parsing. Intermediate steps are currently mainly serialized R objects, but the ultimate objective is to have language-agnostic intermediate formats allowing composite workflows using a variety of software packages.
- Homepage
https://github.com/ebi-gene-expression-group/bioconductor-sc3-scripts
- License
GPL / GPL-3
- Recipe
- package sc3-scripts¶
-
- Versions
0.0.6-0
,0.0.5-0
,0.0.4-0
- Depends
bioconductor-sc3
>=1.10.0,<1.11
r-base
>=3.5.1,<3.5.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install sc3-scripts
and update with:
conda update sc3-scripts
or use the docker container:
docker pull quay.io/biocontainers/sc3-scripts:<tag>
(see sc3-scripts/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/sc3-scripts/README.html)