recipe scallop-lr

Scallop-LR is a reference-based transcriptome assembler for long-reads RNA-seq data

Homepage:

https://github.com/Kingsford-Group/lrassemblyanalysis

License:

BSD 3-Clause License

Recipe:

/scallop-lr/meta.yaml

package scallop-lr

Versions:

0.9.2-5,  0.9.2-4,  0.9.2-3,  0.9.2-2,  0.9.2-1,  0.9.2-0

Depends:

• boost-cpp >=1.74.0,<1.74.1.0a0

• htslib >=1.14,<1.15.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install scallop-lr

and update with:

conda update scallop-lr

or use the docker container:

docker pull quay.io/biocontainers/scallop-lr:<tag>

(see scallop-lr/tags for valid values for <tag>)

Download stats

Link to this page

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