recipe scallop-lr

Scallop-LR is a reference-based transcriptome assembler for long-reads RNA-seq data

Homepage

https://github.com/Kingsford-Group/lrassemblyanalysis

License

BSD 3-Clause License

Recipe

/scallop-lr/meta.yaml

package scallop-lr

Versions

0.9.2-3,  0.9.2-2,  0.9.2-1,  0.9.2-0

Depends

• boost-cpp >=1.74.0,<1.74.1.0a0

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.3.0

• libstdcxx-ng >=9.3.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install scallop-lr

and update with:

conda update scallop-lr

or use the docker container:

docker pull quay.io/biocontainers/scallop-lr:<tag>

(see scallop-lr/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/scallop-lr/README.html)