recipe scanpy-scripts

A set of wrappers for individual components of the scanpy package. Functions in python packages are hard to call when building workflows outside of python, so this package adds a set of simple wrappers with robust argument parsing.

Homepage:https://github.com/ebi-gene-expression-group/scanpy-scripts
License:GPL / GPL-3
Recipe:/scanpy-scripts/meta.yaml
package scanpy-scripts

(downloads) docker_scanpy-scripts

Versions:

0.0.5-2, 0.0.5-1, 0.0.5-0, 0.0.4-2, 0.0.4-1, 0.0.3-1, 0.0.2-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install scanpy-scripts

and update with:

conda update scanpy-scripts

or use the docker container:

docker pull quay.io/biocontainers/scanpy-scripts:<tag>

(see scanpy-scripts/tags for valid values for <tag>)