recipe scexecute

SCExecute generates cell-barcode specific BAM files from aligned, aggregate single-cell sequencing data, executing a user-provided command on each barcode-stratified BAM file.

Homepage:

https://horvathlab.github.io/NGS/SCExecute

License:

MIT

Recipe:

/scexecute/meta.yaml

package scexecute

(downloads) docker_scexecute

Versions:

1.3.2-01.3.1-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install scexecute

and update with:

conda update scexecute

or use the docker container:

docker pull quay.io/biocontainers/scexecute:<tag>

(see scexecute/tags for valid values for <tag>)

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