scg

downloads

The single cell genotyper (SCG): “Roth A, McPherson A, Laks E, Biele J, Yap D, Wan A, et al. Clonal genotype and population structure inference from single-cell tumor sequencing. Nat Meth. 2016;13: 573–576. doi:10.1038/nmeth.3867”

Home https://bitbucket.org/aroth85/scg/wiki/Home
Versions 0.3.1
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/scg

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install scg

and update with:

conda update scg

docker

A Docker container is available at https://quay.io/repository/biocontainers/scg.