recipe scoring-matrices

Dependency free, Cython-compatible scoring matrices to use with biological sequences.

Homepage:

https://github.com/althonos/scoring-matrices

Documentation:

https://scoring-matrices.readthedocs.org

License:

MIT / MIT

Recipe:

/scoring-matrices/meta.yaml

package scoring-matrices

versions:

0.3.0-0,  0.2.2-1,  0.2.2-0,  0.2.1-1,  0.2.1-0,  0.2.0-1,  0.2.0-0

depends libgcc:

>=12

depends python:

>=3.13,<3.14.0a0

depends python_abi:

3.13.* *_cp313

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install scoring-matrices

and update with::

   mamba update scoring-matrices

To create a new environment, run:

mamba create --name myenvname scoring-matrices

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/scoring-matrices:<tag>

(see `scoring-matrices/tags`_ for valid values for ``<tag>``)

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Link to this page

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