recipe secapr

Process sequence-capture FASTQ files into alignments for phylogenetic analyses. Integrates allele phasing.

Homepage

https://github.com/AntonelliLab/seqcap_processor

License

MIT

Recipe

/secapr/meta.yaml

package secapr

(downloads) docker_secapr

Versions
2.2.3-02.2.1-02.1.1-02.1.0-02.0.3-02.0.2-01.1.15-21.1.15-11.1.15-0

2.2.3-02.2.1-02.1.1-02.1.0-02.0.3-02.0.2-01.1.15-21.1.15-11.1.15-01.1.14-01.1.12-01.1.10-21.1.10-01.1.9-01.1.8-01.1.7-01.1.4-01.1.0-01.0.2-01.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install secapr

and update with:

conda update secapr

or use the docker container:

docker pull quay.io/biocontainers/secapr:<tag>

(see secapr/tags for valid values for <tag>)

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