recipe segmentation-fold

RNA-Folding with predefined segments including K-turns and loop-E-motifs

Homepage

https://github.com/yhoogstrate/segmentation-fold

License

GNU General Public License v3 or later (GPLv3+)

Recipe

/segmentation-fold/meta.yaml

package segmentation-fold

Versions

1.7.0-2,  1.7.0-1,  1.7.0-0,  1.6.8-0

Depends

• boost >=1.63.0,<1.63.1.0a0

• click >=4.0

• htseq >=0.6.1

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• pysam >=0.8.1,<=0.8.3

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install segmentation-fold

and update with:

conda update segmentation-fold

or use the docker container:

docker pull quay.io/biocontainers/segmentation-fold:<tag>

(see segmentation-fold/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/segmentation-fold/README.html)