recipe segmentation-fold

RNA-Folding with predefined segments including K-turns and loop-E-motifs

Homepage

https://github.com/yhoogstrate/segmentation-fold

License

GNU General Public License v3 or later (GPLv3+)

Recipe

/segmentation-fold/meta.yaml

package segmentation-fold

(downloads) docker_segmentation-fold

Versions

1.7.0-1, 1.7.0-0, 1.6.8-0

Depends boost

>=1.63.0,<1.63.1.0a0

Depends click

>=4.0

Depends htseq

>=0.6.1

Depends libgcc-ng

>=4.9

Depends pysam

>=0.8.1,<=0.8.3

Depends python

>=2.7,<2.8.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install segmentation-fold

and update with:

conda update segmentation-fold

or use the docker container:

docker pull quay.io/biocontainers/segmentation-fold:<tag>

(see segmentation-fold/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/segmentation-fold/README.html)