recipe seq2hla

Precision HLA typing and expression from next-generation RNA sequencing data

Homepage:

https://bitbucket.org/sebastian_boegel/seq2hla

License:

MIT

Recipe:

/seq2hla/meta.yaml

Links:

biotools: seq2hla

package seq2hla

Versions:

2.2-2,  2.2-1,  2.2-0

Depends:

• biopython >=1.58

• bowtie 1.1.2

• python <3

• r-base

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install seq2hla

and update with:

conda update seq2hla

or use the docker container:

docker pull quay.io/biocontainers/seq2hla:<tag>

(see seq2hla/tags for valid values for <tag>)

Download stats

Link to this page

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