- recipe seq2science
Automated preprocessing of Next-Generation-Sequencing data.
- Homepage:
- Developer docs:
- License:
MIT / MIT
- Recipe:
- package seq2science¶
-
- Versions:
1.0.0-0
,0.9.9-0
,0.9.8-0
,0.9.7-0
,0.9.6-0
,0.9.5-0
,0.9.4-0
,0.9.3-0
,0.9.2-1
,1.0.0-0
,0.9.9-0
,0.9.8-0
,0.9.7-0
,0.9.6-0
,0.9.5-0
,0.9.4-0
,0.9.3-0
,0.9.2-1
,0.9.2-0
,0.9.1-0
,0.9.0-0
,0.8.0-0
,0.7.2-0
,0.7.1-0
,0.7.0-0
,0.6.1-0
,0.6.0-0
,0.5.6-0
,0.5.5-0
,0.5.4-0
,0.5.3-0
,0.5.2-0
,0.5.1-0
,0.5.0-0
,0.4.3-0
,0.4.2-0
,0.4.1-0
,0.4.0-1
,0.4.0-0
,0.3.2-0
,0.3.1-0
,0.3.0-0
,0.2.3-0
,0.2.2-1
,0.2.2-0
,0.2.1-0
,0.2.0-0
,0.1.0-0
,0.0.3-0
,0.0.2-0
,0.0.1-0
,0.0.0-0
- Depends:
argcomplete
3.0.5.*
biopython
1.81.*
conda
23.1.0.*
filelock
3.10.7.*
genomepy
0.15.0.*
mamba
1.2.0.*
matplotlib-base
3.7.1.*
pandas
1.5.3.*
pandas_schema
0.3.5.*
pysradb
2.0.1.*
python
3.10.*
pyyaml
6.0.*
snakemake-minimal
7.25.0.*
tabulate
0.9.0.*
trackhub
0.1.2019.12.24.*
xdg
6.0.0.*
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install seq2science
and update with:
conda update seq2science
or use the docker container:
docker pull quay.io/biocontainers/seq2science:<tag>
(see seq2science/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/seq2science/README.html)