- recipe seqchromloader
Sequence and chromatin dataloader for deep learning
- Homepage:
- Documentation:
- Developer docs:
- License:
MIT
- Recipe:
- package seqchromloader¶
-
- Versions:
0.2.4-0
,0.2.1-0
- Depends:
numpy
>=1.17
pybedtools
>=0.9.0
pybigwig
>=0.3.0
pyfasta
>=0.5.0
pysam
>=0.19.0
python
>=3.7,<3.10
pytorch
>=1.10.0
pytorch-lightning
>=1.7.0,<1.8.0
webdataset
>=0.2.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install seqchromloader
and update with:
conda update seqchromloader
or use the docker container:
docker pull quay.io/biocontainers/seqchromloader:<tag>
(see seqchromloader/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/seqchromloader/README.html)