recipe sequana_pipetools

A set of tools to help building or using Sequana pipelines

Homepage:

https://github.com/sequana/sequana_pipetools

License:

BSD / BSD 3-clause

Recipe:

/sequana_pipetools/meta.yaml

package sequana_pipetools

versions:

0.9.4-0,  0.9.0-0,  0.8.1-0,  0.8.0-0,  0.7.6-0,  0.7.5-0

depends aiohttp:

depends deprecated:

depends easydev:

depends importlib_resources:

depends parse:

depends pykwalify:

depends python:

depends pyyaml:

depends ruamel.yaml:

depends tqdm:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install sequana_pipetools

and update with::

   mamba update sequana_pipetools

To create a new environment, run:

mamba create --name myenvname sequana_pipetools

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/sequana_pipetools:<tag>

(see `sequana_pipetools/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/sequana_pipetools/README.html)