recipe sfs

CLI tool for site frequency spectra.

Homepage:

https://github.com/malthesr/sfs

License:

MIT

Recipe:

/sfs/meta.yaml

A Rust CLI tool for creating and working with the site frequency spectra.

package sfs

(downloads) docker_sfs

versions:

0.1.0-0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install sfs

and update with::

   mamba update sfs

To create a new environment, run:

mamba create --name myenvname sfs

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/sfs:<tag>

(see `sfs/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/sfs/README.html)