recipe shiptv

Generate a standalone HTML file with an interactive phylogenetic tree using PhyloCanvas

Homepage:

https://github.com/peterk87/shiptv

License:

APACHE / Apache Software License

Recipe:

/shiptv/meta.yaml

package shiptv

versions:

0.4.1-0,  0.4.0-0

depends biopython:

depends click:

depends jinja2:

depends pandas:

depends python:

depends requests:

depends rich:

depends typer:

>=0.3.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install shiptv

and update with::

   mamba update shiptv

To create a new environment, run:

mamba create --name myenvname shiptv

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/shiptv:<tag>

(see `shiptv/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/shiptv/README.html)