recipe sickle-trim

Windowed Adaptive Trimming for fastq files using quality

Homepage:

https://github.com/najoshi/sickle

License:

MIT

Recipe:

/sickle-trim/meta.yaml

package sickle-trim

Versions:

1.33-9,  1.33-8,  1.33-7,  1.33-6,  1.33-5,  1.33-4,  1.33-3,  1.33-2,  1.33-1, 

1.33-9,  1.33-8,  1.33-7,  1.33-6,  1.33-5,  1.33-4,  1.33-3,  1.33-2,  1.33-1,  1.33-0

Depends:

• libgcc-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• zlib

Required By:

• pgcgap

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sickle-trim

and update with:

conda update sickle-trim

or use the docker container:

docker pull quay.io/biocontainers/sickle-trim:<tag>

(see sickle-trim/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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