recipe simlord

SimLoRD is a read simulator for long reads from third generation sequencing. Currently, it supports the Pacific Biosciences SMRT error model.

Homepage:

https://bitbucket.org/genomeinformatics/simlord/

License:

MIT License

Recipe:

/simlord/meta.yaml

package simlord

Versions:

1.0.4-2,  1.0.4-1,  1.0.4-0,  1.0.3-3,  1.0.3-2,  1.0.2-2,  1.0.2-0,  1.0.1-0,  0.7.3-0

Depends:

• dinopy

• libgcc-ng >=12

• numpy

• pysam >=0.8.4

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• scipy

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install simlord

and update with:

conda update simlord

or use the docker container:

docker pull quay.io/biocontainers/simlord:<tag>

(see simlord/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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