recipe simlord

SimLoRD is a read simulator for long reads from third generation sequencing. Currently, it supports the Pacific Biosciences SMRT error model.

Homepage

https://bitbucket.org/genomeinformatics/simlord/

License

MIT License

Recipe

/simlord/meta.yaml

package simlord

Versions

1.0.4-1,  1.0.4-0,  1.0.3-3,  1.0.3-2,  1.0.2-2,  1.0.2-0,  1.0.1-0,  0.7.3-0

Depends

• dinopy

• libgcc-ng >=7.5.0

• numpy

• pysam >=0.8.4

• python >=3.6,<3.7.0a0

• python_abi 3.6.* *_cp36m

• scipy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install simlord

and update with:

conda update simlord

or use the docker container:

docker pull quay.io/biocontainers/simlord:<tag>

(see simlord/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/simlord/README.html)