- recipe singlem
SingleM is a tool to find the abundances of discrete operational taxonomic units (OTUs) directly from shotgun metagenome data, without heavy reliance on reference sequence databases. It is able to differentiate closely related species even if those species are from lineages new to science.
- Homepage:
- License:
GPL3 / GNU General Public v3 (GPLv3)
- Recipe:
- package singlem¶
-
- Versions:
0.13.2-2
,0.13.2-1
,0.13.2-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install singlem
and update with:
conda update singlem
or use the docker container:
docker pull quay.io/biocontainers/singlem:<tag>
(see singlem/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/singlem/README.html)