recipe smallgenomeutilities/0.2.1

A collection of scripts that are useful for dealing with viral RNA NGS data.

Homepage

https://github.com/cbg-ethz/smallgenomeutilities

License

GPL2 / GNU General Public License v2 or later (GPLv2+)

Recipe

/smallgenomeutilities/0.2.1/meta.yaml

package smallgenomeutilities

(downloads) docker_smallgenomeutilities

Versions

0.2.1-1, 0.2.1-0, 0.1-1, 0.1-0

Depends biopython

Depends matplotlib

Depends numpy

Depends progress

Depends pysam

Depends python

>=3.5,<3.6.0a0

Depends scikit-learn

Depends scipy

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install smallgenomeutilities

and update with:

conda update smallgenomeutilities

or use the docker container:

docker pull quay.io/biocontainers/smallgenomeutilities:<tag>

(see smallgenomeutilities/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/smallgenomeutilities/README.html)