recipe smalt

SMALT aligns DNA sequencing reads with a reference genome.

Homepage:

http://www.sanger.ac.uk/science/tools/smalt-0

License:

GPLv3

Recipe:

/smalt/meta.yaml

Links:

biotools: Smalt

package smalt

Versions:

0.7.6-1,  0.7.6-0

Depends:

• bambamc

• libgcc

• zlib 1.2.11*

Required By:

• shiver

• biotradis

• iva

• quatradis

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install smalt

and update with:

conda update smalt

or use the docker container:

docker pull quay.io/biocontainers/smalt:<tag>

(see smalt/tags for valid values for <tag>)

Download stats

Link to this page

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