Package Recipe 'smartmap'

recipe smartmap

SmartMap: Bayesian Analysis of Ambiguously Mapped Reads

Homepage:: http://shah-rohan.github.io/SmartMap
License:: MIT
Recipe:: /smartmap/meta.yaml

package smartmap¶

Versions:

1.0.0-3, 1.0.0-2, 1.0.0-1, 1.0.0-0

Depends:

bedtools
bowtie2
hisat2
libgcc-ng >=12
libstdcxx-ng >=12
libzlib >=1.2.13,<1.3.0a0
python >=3.8.5
samtools >=1.10

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install smartmap

and update with:

conda update smartmap

or use the docker container:

docker pull quay.io/biocontainers/smartmap:<tag>

(see smartmap/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/smartmap/README.html)