recipe snakelines

Computational pipelines for processing of paired-end sequencing reads.

Homepage:

https://snakelines.readthedocs.io/en/latest/

License:

CC BY-NC-SA

Recipe:

/snakelines/meta.yaml

package snakelines

Versions:

1.1.8-0,  1.1.4-0,  1.1.0-0,  1.0.4-0,  0.10.0-1,  0.10.0-0,  0.9.2-0

Depends:

• bs4 >=4.9,<4.10

• jinja2 >=3.1.2,<3.2

• multiqc >=1.10,<1.11

• numpy >=1.19,<1.20

• oyaml >=0.9,<1.0

• pandas >=1.1,<1.2

• parse >=1.19.0,<1.20

• pygraphviz >=1.7,<1.8

• python >=3.9,<3.10

• seaborn >=0.11,<0.12

• snakemake-minimal >=7.18,<7.19

• tk >=8.6,<8.7

• weasyprint >=51,<52

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install snakelines

and update with:

conda update snakelines

or use the docker container:

docker pull quay.io/biocontainers/snakelines:<tag>

(see snakelines/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/snakelines/README.html)