recipe snakemake-storage-plugin-s3

A Snakemake storage plugin for S3 API storage (AWS S3, MinIO, etc.)

Homepage:

https://github.com/snakemake/snakemake-storage-plugin-s3

Documentation:

https://snakemake.github.io/snakemake-plugin-catalog/plugins/storage/s3.html

License:

MIT / MIT

Recipe:

/snakemake-storage-plugin-s3/meta.yaml

package snakemake-storage-plugin-s3

versions:

0.2.11-0,  0.2.10-0,  0.2.9-0,  0.2.8-1,  0.2.8-0

depends boto3:

>=1.33.0,<2.0.0

depends botocore:

>=1.33.0,<2.0.0

depends python:

>=3.11.0,<4.0.0

depends snakemake-interface-common:

>=1.14.0,<2.0.0

depends snakemake-interface-storage-plugins:

>=3.2.2,<4.0.0

depends urllib3:

>=2.0,<2.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install snakemake-storage-plugin-s3

and update with::

   mamba update snakemake-storage-plugin-s3

To create a new environment, run:

mamba create --name myenvname snakemake-storage-plugin-s3

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/snakemake-storage-plugin-s3:<tag>

(see `snakemake-storage-plugin-s3/tags`_ for valid values for ``<tag>``)

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