recipe snpsplit

SNPsplit is an allele-specific alignment sorter which is designed to read in alignment files in SAM/BAM format and determine the allelic origin of reads that cover known SNP positions.

Homepage

https://www.bioinformatics.babraham.ac.uk/projects/SNPsplit/

License

GPL3 / GNU General Public License v3 (GPLv3)

Recipe

/snpsplit/meta.yaml

Links

doi: 10.12688/f1000research.9037.2

package snpsplit

(downloads) docker_snpsplit

Versions

0.3.4-1, 0.3.4-0, 0.3.3-1, 0.3.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install snpsplit

and update with:

conda update snpsplit

or use the docker container:

docker pull quay.io/biocontainers/snpsplit:<tag>

(see snpsplit/tags for valid values for <tag>)