snvphyl-tools

downloads

The SNVPhyl (Single Nucleotide Variant PHYLogenomics) pipeline is a pipeline for identifying Single Nucleotide Variants (SNV) within a collection of microbial genomes and constructing a phylogenetic tree

Home https://github.com/phac-nml/snvphyl-tools
Versions 1.8.1
License apache_2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/snvphyl-tools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install snvphyl-tools

and update with:

conda update snvphyl-tools

docker

A Docker container is available at https://quay.io/repository/biocontainers/snvphyl-tools.