recipe sourmash

Compute and compare MinHash signatures for DNA data sets.

Homepage

https://github.com/dib-lab/sourmash

Documentation

https://sourmash.readthedocs.io/

License

BSD / BSD-3-Clause

Recipe

/sourmash/meta.yaml

Links

biotools: sourmash, doi: 10.21105/joss.00027, doi: 10.12688/f1000research.19675.1

package sourmash

(downloads) docker_sourmash

Versions
3.5.0-03.4.1-03.4.0-03.3.1-03.3.0-13.3.0-03.2.3-03.2.2-13.2.2-0

3.5.0-03.4.1-03.4.0-03.3.1-03.3.0-13.3.0-03.2.3-03.2.2-13.2.2-03.2.1-13.2.1-03.2.0-03.1.0-03.0.1-03.0.0-02.3.1-02.3.0-02.2.0-12.2.0-02.1.0-02.0.1-02.0.0-12.0.0-02.0.0a11-02.0.0a10-02.0.0a9-02.0.0a8-22.0.0a8-12.0.0a8-02.0.0a7-02.0.0a6-02.0.0a5-02.0.0a4-02.0.0a3-02.0.0a2-02.0.0a1-32.0.0a1-22.0.0a1-12.0.0a1-01.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install sourmash

and update with:

conda update sourmash

or use the docker container:

docker pull quay.io/biocontainers/sourmash:<tag>

(see sourmash/tags for valid values for <tag>)