recipe spotyping3

SpoTyping3: fast and accurate in silico Mycobacterium spoligotyping from sequence reads, compatible with Python3

Homepage

https://github.com/matnguyen/SpoTyping

License

GPL / GPL-3

Recipe

/spotyping3/meta.yaml

Links

DOI: 10.1186/s13073-016-0270-7

package spotyping3

(downloads) docker_spotyping3

Versions

3.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install spotyping3

and update with:

conda update spotyping3

or use the docker container:

docker pull quay.io/biocontainers/spotyping3:<tag>

(see spotyping3/tags for valid values for <tag>)