recipe stacks

Stacks is a software pipeline for building loci from RAD-seq

Homepage

http://catchenlab.life.illinois.edu/stacks/

License

GPL

Recipe

/stacks/meta.yaml

Links

biotools: Stacks, doi: 10.1111/mec.12354

package stacks

(downloads) docker_stacks

Versions
2.53-12.53-02.52-02.5-02.4-12.4-02.3-42.3-32.3d-1

2.53-12.53-02.52-02.5-02.4-12.4-02.3-42.3-32.3d-12.3d-02.3c-12.3c-02.3b-12.3b-02.2-42.2-32.2-22.2-12.2-02.1-32.1-22.1-12.0-22.0-12.0-02.0Beta10a-02.0Beta9-02.0Beta8-12.0Beta8-02.0Beta8c-12.0Beta8c-02.0Beta7c-01.47-21.47-11.47-01.46-21.46-11.46-01.44-31.44-21.44-11.44-01.43-21.43-11.43-01.42-51.42-41.42-31.42-21.42-11.40-31.40-21.40-11.40-01.37-31.37-21.37-11.37-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install stacks

and update with:

conda update stacks

or use the docker container:

docker pull quay.io/biocontainers/stacks:<tag>

(see stacks/tags for valid values for <tag>)