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recipe
stacks/1.37¶ Stacks is a software pipeline for building loci from RAD-seq
Homepage: http://catchenlab.life.illinois.edu/stacks/ License: GPL Recipe: /stacks/1.37/meta.yaml Links: biotools: Stacks, doi: 10.1111/mec.12354
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package
stacks¶ 
Versions: 2.3-3, 2.3d-0, 2.3c-0, 2.3b-0, 2.2-3, 2.2-2, 2.2-1, 2.2-0, 2.1-2, 2.1-1, 2.0-1, 2.0-0, 2.0Beta10a-0, 2.0Beta9-0, 2.0Beta8-1, 2.0Beta8-0, 2.0Beta8c-1, 2.0Beta8c-0, 2.0Beta7c-0, 1.47-2, 1.47-1, 1.47-0, 1.46-1, 1.46-0, 1.44-3, 1.44-2, 1.44-1, 1.44-0, 1.43-2, 1.43-1, 1.43-0, 1.42-5, 1.42-4, 1.42-3, 1.42-2, 1.42-1, 1.40-3, 1.40-2, 1.40-1, 1.40-0, 1.37-2, 1.37-1, 1.37-0
Depends: - libcxx >=4.0.1
- perl
- perl-bioperl-core
- perl-file-spec
- perl-file-temp
- perl-posix
- python >=3
- samtools
- velvet
- zlib >=1.2.11,<1.3.0a0
Required By: Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install stacks
and update with:
conda update stacks
or use the docker container:
docker pull quay.io/biocontainers/stacks:<tag>
(see stacks/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/stacks/README.html)