recipe stacks_summary

Stacks reports generator

Homepage:

https://github.com/mariabernard/galaxy_wrappers

License:

GPL / GNU General Public License v3 or later (GPLv3+)

Recipe:

/stacks_summary/meta.yaml

package stacks_summary

(downloads) docker_stacks_summary

versions:

1.1-1,  1.1-0,  1.0-1,  1.0-0

depends numpy:

depends python:

>=2.7,<2.8.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install stacks_summary

and update with::

   mamba update stacks_summary

To create a new environment, run:

mamba create --name myenvname stacks_summary

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/stacks_summary:<tag>

(see `stacks_summary/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/stacks_summary/README.html)