- recipe straindesign
Library to perform metabolic engineering tasks
- Homepage:
- License:
MIT
- Recipe:
- package straindesign¶
- versions:
3.2.3-0,3.2.2-0,3.2.0-0,3.1.0-0,3.0.0-0- depends biopython:
- depends blessings:
- depends cobra:
>=0.24- depends escher:
- depends future:
- depends gnomic:
- depends inspyred:
- depends iprogress:
- depends lazy-object-proxy:
- depends networkx:
- depends numexpr:
- depends openbabel:
- depends openpyxl:
- depends ordered-set:
- depends palettable:
- depends pandas:
- depends plotly:
- depends python:
>=3.8- depends redis-py:
- depends requests:
- depends scipy:
- depends seaborn:
- requirements:
Installation
You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install straindesign and update with:: mamba update straindesign
To create a new environment, run:
mamba create --name myenvname straindesign
with
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).Alternatively, use the docker container:
docker pull quay.io/biocontainers/straindesign:<tag> (see `straindesign/tags`_ for valid values for ``<tag>``)
Download stats¶
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/straindesign/README.html)
