recipe subread

High-performance read alignment, quantification, and mutation discovery

Homepage

http://subread.sourceforge.net/

License

GPLv3

Recipe

/subread/meta.yaml

Links

biotools: subread, doi: 10.1093/nar/gkt214

package subread

(downloads) docker_subread

Versions

1.6.4-1, 1.6.3-1, 1.6.3-0, 1.6.2-0, 1.6.1-1, 1.6.1-0, 1.6.0-2, 1.6.0-1, 1.6.0-0, 1.5.3-1, 1.5.3-0, 1.5.2-0, 1.5.0.post3-0, 1.5.0-0, 1.5.0p3-0, 1.4.6p5-0

Depends libgcc-ng

>=7.3.0

Depends zlib

>=1.2.11,<1.3.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install subread

and update with:

conda update subread

or use the docker container:

docker pull quay.io/biocontainers/subread:<tag>

(see subread/tags for valid values for <tag>)