recipe sv2

Support Vector Structural Variation Genotyper

Homepage:

https://github.com/dantaki/SV2

License:

MIT

Recipe:

/sv2/meta.yaml

package sv2

Versions:

1.4.3.4-7,  1.4.3.4-6,  1.4.3.4-5,  1.4.3.4-4,  1.4.3.4-3,  1.4.3.4-2,  1.4.3.4-1,  1.4.3.4-0

Depends:

• bedtools

• libgcc-ng >=10.3.0

• numpy

• pandas

• pybedtools

• pysam >=0.9

• python >=2.7,<2.8.0a0

• python-wget

• python_abi 2.7.* *_cp27mu

• scikit-learn >=0.19

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sv2

and update with:

conda update sv2

or use the docker container:

docker pull quay.io/biocontainers/sv2:<tag>

(see sv2/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/sv2/README.html)