recipe svim-asm

SVIM-asm is a fork of the SV caller SVIM for genome-genome alignments.

Homepage

https://github.com/eldariont/svim-asm

License

GPL / GPL-3.0

Recipe

/svim-asm/meta.yaml

package svim-asm

Versions

0.1.0-0

Depends

• matplotlib

• numpy

• pysam >=0.15

• python >=3.6

• python-edlib

• scipy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install svim-asm

and update with:

conda update svim-asm

or use the docker container:

docker pull quay.io/biocontainers/svim-asm:<tag>

(see svim-asm/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/svim-asm/README.html)