recipe svist4get

A simple visualization tool for genomic tracks from sequencing experiments

Homepage:

https://github.com/art-egorov/svist4get

License:

OTHER / WTFPL

Recipe:

/svist4get/meta.yaml

package svist4get

versions:

1.3.1.1-0,  1.3.1-0,  1.3-0,  1.2.24-0,  1.2.23-0,  1.2.22-0,  1.2.21-0,  1.2.20-0,  1.2.19-0, 

1.3.1.1-0,  1.3.1-0,  1.3-0,  1.2.24-0,  1.2.23-0,  1.2.22-0,  1.2.21-0,  1.2.20-0,  1.2.19-0,  1.2.18-0,  1.2.17.1-0,  1.2.16-0,  1.2.15-0,  1.2.14-1,  1.2.14-0

depends biopython:

depends configs:

depends pybedtools:

depends python:

>=3.4

depends reportlab:

depends wand:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install svist4get

and update with::

   mamba update svist4get

To create a new environment, run:

mamba create --name myenvname svist4get

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/svist4get:<tag>

(see `svist4get/tags`_ for valid values for ``<tag>``)

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